Research

I am interested in developing and applying statistical methods that address important public health and scientific issues. So far, my work has focused on methods and applications studying the health effects of air pollution in vulnerable populations such as children and older adults. I predominantly work with data from large observational cohort studies.

Statistical interests:
Longitudinal models, multilevel models, effect modification, integrated models, latent variables, scaling regression coefficients, reproducible research, modern prediction techniques (machine learning)

Substantive interests:
Environmental epidemiology, biomarkers, aging, exhaled nitric oxide, asthma, traffic-related pollution, cancer, mHealth, wearable sensors

Projects:

PhD thesis projects:

My PhD thesis (advisor: Tom Louis) was composed of three parts. In the first project, "Identifying effect modifiers in air pollution time-series studies using a two-stage analysis", we developed and implemented a method to systematically identify potential effect modifiers of the relationship between daily mortality counts and daily levels of ambient particulate matter in a subset of cities in the National Morbidity and Mortality Air Pollution study. In the second project, "Surrogate models for the low physical activity criterion of frailty in older adults" we developed and implemented methods to: (a) streamline assessement and (b) fill in missing values for physical activity, one of 5 criteria used in a common clinical phenotype of generontologic fraily, in the Cardiovascular Health Study. In the third project, "Modification by frailty status of ambient air pollution effects on lung function in older adults in the Cardiovascular Health Study", we related longitudinal assessments of lung function to either: (a) recent summaries of pollution and current gerontologic frailty status or (b) cumulative summaries of pollution and frailty status history.

Reproducible Research:

As statistical analyses become increasingly complex, we have a growing need to accurately reproduce results. While at JHSPH, I worked with Dr. Roger Peng to create an R package called 'stashR' (A Set of Tools for Administering SHared Repositories) which is part of a toolkit for conducting and distributing reproducible research, particularly in the context of the Sweave system to interweave code (in R) and text (in LaTeX).

Recent Publications

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Johnson EV, Bachmann M, Yani MS, Eckel SP, Garcia GI, Rodriguez LV, Kutch JJ.Trials. 2024 Sep 12;25(1):609. doi: 10.1186/s13063-024-08450-w.PMID: 39261949Free PMC article.

Hu Y, Niu Z, Eckel SP, Toledo-Corral C, Yang T, Chen X, Vigil M, Pavlovic N, Lurmann F, Garcia E, Lerner D, Lurvey N, Grubbs B, Al-Marayati L, Johnston J, Dunton GF, Farzan SF, Habre R, Breton C, Bastain TM.Sci Total Environ. 2024 Sep 7;953:176089. doi: 10.1016/j.scitotenv.2024.176089. Online ahead of print.PMID: 39250973

Garcia E, Eckel SP, Silva SJ, McConnell R, Johnston J, Sanders KT, Habre R, Baccarelli A.Environ Epidemiol. 2024 Aug 21;8(5):e331. doi: 10.1097/EE9.0000000000000331. eCollection 2024 Oct.PMID: 39175801Free PMC article.No abstract available.

Ornelas Van Horne Y, Johnston JE, Barahona DD, Razafy M, Kamai EM, Ruiz BC, Eckel SP, Bejarano E, Olmedo L, Farzan SF.Environ Epidemiol. 2024 Aug 19;8(5):e325. doi: 10.1097/EE9.0000000000000325. eCollection 2024 Oct.PMID: 39165346Free PMC article.

Yi L, Habre R, Mason TB, Xu Y, Cabison J, Rosales M, Chu D, Chavez TA, Johnson M, Eckel SP, Bastain TM, Breton CV, Wilson JP, Dunton GF.J Urban Health. 2024 Aug 15. doi: 10.1007/s11524-024-00903-6. Online ahead of print.PMID: 39145858

Han DH, Harlow AF, Bae D, Cho J, Eckel SP, McConnell R, Barrington-Trimis JL, Audrain-McGovern JE, Leventhal AM.Addict Behav. 2024 Nov;158:108106. doi: 10.1016/j.addbeh.2024.108106. Epub 2024 Jul 19.PMID: 39032200

Baumert BO, Maretti-Mira AC, Li Z, Stratakis N, Zhao Y, Walker DI, Wang H, Fischer FC, Jia Q, Valvi D, Bartell SM, Chen C, Inge T, Ryder J, Jenkins T, Sisley S, Xanthakos S, Kohli R, Rock S, Eckel SP, La Merrill MA, Aung MM, Salomon MP, McConnell R, Goodrich J, Conti DV, Golden-Mason L, Chatzi L.medRxiv [Preprint]. 2024 Jul 3:2024.07.01.24309775. doi: 10.1101/2024.07.01.24309775.PMID: 39006440Free PMC article.Preprint.

Hernandez-Castro I, Eckel SP, Howe CG, Aung MT, Kannan K, Robinson M, Foley HB, Yang T, Vigil MJ, Chen X, Grubbs B, Al-Marayati L, Toledo-Corral CM, Habre R, Dunton GF, Farzan SF, Morales S, Breton CV, Bastain TM.Environ Res. 2024 Oct 15;259:119581. doi: 10.1016/j.envres.2024.119581. Epub 2024 Jul 9.PMID: 38992754

Li Y, Baumert BO, Stratakis N, Goodrich JA, Wu H, Liu SH, Wang H, Beglarian E, Bartell SM, Eckel SP, Walker D, Valvi D, La Merrill MA, Inge TH, Jenkins T, Ryder JR, Sisley S, Kohli R, Xanthakos SA, Vafeiadi M, Margetaki A, Roumeliotaki T, Aung M, McConnell R, Baccarelli A, Conti D, Chatzi L.Environ Res. 2024 Oct 15;259:119496. doi: 10.1016/j.envres.2024.119496. Epub 2024 Jun 25.PMID: 38936497

Hu Y, Chavez T, Eckel SP, Yang T, Chen X, Vigil M, Pavlovic N, Lurmann F, Lerner D, Lurvey N, Grubbs B, Al-Marayati L, Toledo-Corral C, Johnston J, Dunton GF, Farzan SF, Habre R, Breton C, Bastain TM.J Expo Sci Environ Epidemiol. 2024 May 31. doi: 10.1038/s41370-024-00692-9. Online ahead of print.PMID: 38822090